Cluster: HRGMv2_3081_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- CGC Family ID: CGCFAM_00172
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3081_62 | HRGMv2_3081_62_8 | 9138 | 10472 | - | 2.A.86.1.8 |
| NULL(UNKNOWN) | HRGMv2_3081_62 | HRGMv2_3081_62_9 | 10660 | 10782 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3081_62 | HRGMv2_3081_62_10 | 11072 | 11755 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_3081_62 | HRGMv2_3081_62_11 | 11745 | 11891 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3081_62 | HRGMv2_3081_62_12 | 11888 | 13894 | - | 3.A.1.134.9 |
| TC | HRGMv2_3081_62 | HRGMv2_3081_62_13 | 13891 | 14688 | - | 3.A.1.134.4 |
Gene ID: HRGMv2_3081_62_8
Type: TC
Location: 9138 - 10472 (-)
Type: TC
Location: 9138 - 10472 (-)
Gene ID: HRGMv2_3081_62_9
Type:
Location: 10660 - 10782 (+)
Type:
Location: 10660 - 10782 (+)
Gene ID: HRGMv2_3081_62_10
Type: CAZyme
Location: 11072 - 11755 (-)
Type: CAZyme
Location: 11072 - 11755 (-)
Gene ID: HRGMv2_3081_62_11
Type:
Location: 11745 - 11891 (-)
Type:
Location: 11745 - 11891 (-)
Gene ID: HRGMv2_3081_62_12
Type: TC
Location: 11888 - 13894 (-)
Type: TC
Location: 11888 - 13894 (-)
Gene ID: HRGMv2_3081_62_13
Type: TC
Location: 13891 - 14688 (-)
Type: TC
Location: 13891 - 14688 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3081_62_13 | vegetarian > vegan | 1.57260 | 0.00969 |