Cluster: HRGMv2_3081_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3081_60 | HRGMv2_3081_60_16 | 12762 | 14135 | + | GT4 |
| pfam | HRGMv2_3081_60 | HRGMv2_3081_60_17 | 14187 | 14981 | - | AP_endonuc_2 |
| TC | HRGMv2_3081_60 | HRGMv2_3081_60_18 | 15211 | 17292 | - | 3.A.7.7.1 |
Gene ID: HRGMv2_3081_60_16
Type: CAZyme
Location: 12762 - 14135 (+)
Type: CAZyme
Location: 12762 - 14135 (+)
Gene ID: HRGMv2_3081_60_17
Type: pfam
Location: 14187 - 14981 (-)
Type: pfam
Location: 14187 - 14981 (-)
Gene ID: HRGMv2_3081_60_18
Type: TC
Location: 15211 - 17292 (-)
Type: TC
Location: 15211 - 17292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.