Cluster: HRGMv2_3081_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3081
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3081_34 | HRGMv2_3081_34_6 | 5006 | 6295 | + | 3.A.1.1.28 |
| TC | HRGMv2_3081_34 | HRGMv2_3081_34_7 | 6292 | 7170 | + | 3.A.1.1.28 |
| TC | HRGMv2_3081_34 | HRGMv2_3081_34_8 | 7167 | 8075 | + | 3.A.1.1.28 |
| CAZyme | HRGMv2_3081_34 | HRGMv2_3081_34_9 | 8137 | 9546 | + | GH13_18 |
| CAZyme | HRGMv2_3081_34 | HRGMv2_3081_34_10 | 9559 | 11748 | + | GH36 |
Gene ID: HRGMv2_3081_34_6
Type: TC
Location: 5006 - 6295 (+)
Type: TC
Location: 5006 - 6295 (+)
Gene ID: HRGMv2_3081_34_7
Type: TC
Location: 6292 - 7170 (+)
Type: TC
Location: 6292 - 7170 (+)
Gene ID: HRGMv2_3081_34_8
Type: TC
Location: 7167 - 8075 (+)
Type: TC
Location: 7167 - 8075 (+)
Gene ID: HRGMv2_3081_34_9
Type: CAZyme
Location: 8137 - 9546 (+)
Type: CAZyme
Location: 8137 - 9546 (+)
Gene ID: HRGMv2_3081_34_10
Type: CAZyme
Location: 9559 - 11748 (+)
Type: CAZyme
Location: 9559 - 11748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.