Cluster: HRGMv2_3081_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- CGC Family ID: CGCFAM_01835
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3081_2 | HRGMv2_3081_2_105 | 118023 | 119123 | - | 4.D.2.1.5 |
| STP | HRGMv2_3081_2 | HRGMv2_3081_2_106 | 119492 | 120010 | - | Nitroreductase | Nitroreductase |
| CAZyme | HRGMv2_3081_2 | HRGMv2_3081_2_107 | 120181 | 122847 | - | GH2 |
Gene ID: HRGMv2_3081_2_105
Type: TC
Location: 118023 - 119123 (-)
Type: TC
Location: 118023 - 119123 (-)
Gene ID: HRGMv2_3081_2_106
Type: STP
Location: 119492 - 120010 (-)
Type: STP
Location: 119492 - 120010 (-)
Gene ID: HRGMv2_3081_2_107
Type: CAZyme
Location: 120181 - 122847 (-)
Type: CAZyme
Location: 120181 - 122847 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3081_2_106 | vegetarian > omnivore | 2.86855 | 0.04808 |
| HRGMv2_3081_2_106 | vegetarian > vegan | 3.06594 | 0.00969 |