Cluster: HRGMv2_3081_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3081_23 | HRGMv2_3081_23_7 | 7398 | 8456 | + | CE2 |
| pfam | HRGMv2_3081_23 | HRGMv2_3081_23_8 | 8701 | 9801 | + | ABC_sub_bind |
| TC | HRGMv2_3081_23 | HRGMv2_3081_23_9 | 9903 | 10901 | + | 3.A.1.34.1 |
| TC | HRGMv2_3081_23 | HRGMv2_3081_23_10 | 10901 | 11704 | + | 3.A.1.34.1 |
| peptidase | HRGMv2_3081_23 | HRGMv2_3081_23_11 | 11800 | 13377 | - | I87.UPW |
| pfam | HRGMv2_3081_23 | HRGMv2_3081_23_12 | 13389 | 13760 | - | Hpt |
| TC | HRGMv2_3081_23 | HRGMv2_3081_23_13 | 13890 | 14906 | - | 9.B.157.1.1 |
Gene ID: HRGMv2_3081_23_7
Type: CAZyme
Location: 7398 - 8456 (+)
Type: CAZyme
Location: 7398 - 8456 (+)
Gene ID: HRGMv2_3081_23_8
Type: pfam
Location: 8701 - 9801 (+)
Type: pfam
Location: 8701 - 9801 (+)
Gene ID: HRGMv2_3081_23_9
Type: TC
Location: 9903 - 10901 (+)
Type: TC
Location: 9903 - 10901 (+)
Gene ID: HRGMv2_3081_23_10
Type: TC
Location: 10901 - 11704 (+)
Type: TC
Location: 10901 - 11704 (+)
Gene ID: HRGMv2_3081_23_11
Type: peptidase
Location: 11800 - 13377 (-)
Type: peptidase
Location: 11800 - 13377 (-)
Gene ID: HRGMv2_3081_23_12
Type: pfam
Location: 13389 - 13760 (-)
Type: pfam
Location: 13389 - 13760 (-)
Gene ID: HRGMv2_3081_23_13
Type: TC
Location: 13890 - 14906 (-)
Type: TC
Location: 13890 - 14906 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.