Cluster: HRGMv2_3081_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3081
- CGC Family ID: CGCFAM_07605
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3081_13 | HRGMv2_3081_13_8 | 10123 | 11433 | - | GH43_35 |
| TC | HRGMv2_3081_13 | HRGMv2_3081_13_9 | 11741 | 13423 | + | 1.B.52.2.2 |
| TC | HRGMv2_3081_13 | HRGMv2_3081_13_10 | 13656 | 14516 | - | 2.A.7.2.1 |
| TC | HRGMv2_3081_13 | HRGMv2_3081_13_11 | 14756 | 17086 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_3081_13 | HRGMv2_3081_13_12 | 17256 | 17405 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3081_13 | HRGMv2_3081_13_13 | 17522 | 18946 | - | 1.A.26.1.3 |
Gene ID: HRGMv2_3081_13_8
Type: CAZyme
Location: 10123 - 11433 (-)
Type: CAZyme
Location: 10123 - 11433 (-)
Gene ID: HRGMv2_3081_13_9
Type: TC
Location: 11741 - 13423 (+)
Type: TC
Location: 11741 - 13423 (+)
Gene ID: HRGMv2_3081_13_10
Type: TC
Location: 13656 - 14516 (-)
Type: TC
Location: 13656 - 14516 (-)
Gene ID: HRGMv2_3081_13_11
Type: TC
Location: 14756 - 17086 (-)
Type: TC
Location: 14756 - 17086 (-)
Gene ID: HRGMv2_3081_13_12
Type:
Location: 17256 - 17405 (+)
Type:
Location: 17256 - 17405 (+)
Gene ID: HRGMv2_3081_13_13
Type: TC
Location: 17522 - 18946 (-)
Type: TC
Location: 17522 - 18946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3081_13_8 | vegetarian > vegan | 1.04259 | 0.00969 |