Cluster: HRGMv2_3081_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3081
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3081_13 | HRGMv2_3081_13_1 | 96 | 2327 | - | GH74 |
| TF | HRGMv2_3081_13 | HRGMv2_3081_13_2 | 2578 | 3384 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3081_13 | HRGMv2_3081_13_3 | 3486 | 6212 | + | GH59 |
| TC | HRGMv2_3081_13 | HRGMv2_3081_13_4 | 6274 | 6765 | - | 1.A.22.1.1 |
Gene ID: HRGMv2_3081_13_1
Type: CAZyme
Location: 96 - 2327 (-)
Type: CAZyme
Location: 96 - 2327 (-)
Gene ID: HRGMv2_3081_13_2
Type: TF
Location: 2578 - 3384 (+)
Type: TF
Location: 2578 - 3384 (+)
Gene ID: HRGMv2_3081_13_3
Type: CAZyme
Location: 3486 - 6212 (+)
Type: CAZyme
Location: 3486 - 6212 (+)
Gene ID: HRGMv2_3081_13_4
Type: TC
Location: 6274 - 6765 (-)
Type: TC
Location: 6274 - 6765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp900768125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.