Cluster: HRGMv2_3075_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3075_38 | HRGMv2_3075_38_12 | 12881 | 14524 | - | 4.C.1.1.6 |
| CAZyme | HRGMv2_3075_38 | HRGMv2_3075_38_13 | 14785 | 18369 | - | GH13_19 |
| TC | HRGMv2_3075_38 | HRGMv2_3075_38_14 | 18929 | 20323 | + | 3.A.1.1.45 |
| TC | HRGMv2_3075_38 | HRGMv2_3075_38_15 | 20427 | 21269 | + | 3.A.1.1.45 |
| TC | HRGMv2_3075_38 | HRGMv2_3075_38_16 | 21269 | 22147 | + | 3.A.1.1.45 |
Gene ID: HRGMv2_3075_38_12
Type: TC
Location: 12881 - 14524 (-)
Type: TC
Location: 12881 - 14524 (-)
Gene ID: HRGMv2_3075_38_13
Type: CAZyme
Location: 14785 - 18369 (-)
Type: CAZyme
Location: 14785 - 18369 (-)
Gene ID: HRGMv2_3075_38_14
Type: TC
Location: 18929 - 20323 (+)
Type: TC
Location: 18929 - 20323 (+)
Gene ID: HRGMv2_3075_38_15
Type: TC
Location: 20427 - 21269 (+)
Type: TC
Location: 20427 - 21269 (+)
Gene ID: HRGMv2_3075_38_16
Type: TC
Location: 21269 - 22147 (+)
Type: TC
Location: 21269 - 22147 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.