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Cluster: HRGMv2_3075_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3075_36 HRGMv2_3075_36_9 9659 11164 - 4.C.1.1.7
pfam HRGMv2_3075_36 HRGMv2_3075_36_10 11192 12754 - PMT_2
STP HRGMv2_3075_36 HRGMv2_3075_36_11 12770 14599 - SIS | SIS
TC HRGMv2_3075_36 HRGMv2_3075_36_12 14639 16516 - 9.B.18.2.1
pfam HRGMv2_3075_36 HRGMv2_3075_36_13 16620 16964 - EamA | TPT
pfam HRGMv2_3075_36 HRGMv2_3075_36_14 16957 17331 - EamA
CAZyme HRGMv2_3075_36 HRGMv2_3075_36_15 17300 18256 - GT2
Gene ID: HRGMv2_3075_36_9
Type: TC
Location: 9659 - 11164 (-)
Gene ID: HRGMv2_3075_36_10
Type: pfam
Location: 11192 - 12754 (-)
Gene ID: HRGMv2_3075_36_11
Type: STP
Location: 12770 - 14599 (-)
Gene ID: HRGMv2_3075_36_12
Type: TC
Location: 14639 - 16516 (-)
Gene ID: HRGMv2_3075_36_13
Type: pfam
Location: 16620 - 16964 (-)
Gene ID: HRGMv2_3075_36_14
Type: pfam
Location: 16957 - 17331 (-)
Gene ID: HRGMv2_3075_36_15
Type: CAZyme
Location: 17300 - 18256 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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