Cluster: HRGMv2_3075_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3075
- CGC Family ID: CGCFAM_06200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3075_14 | HRGMv2_3075_14_26 | 20328 | 22733 | + | GT51 |
| pfam | HRGMv2_3075_14 | HRGMv2_3075_14_27 | 22909 | 24144 | + | Homoserine_dh | NAD_binding_3 |
| STP | HRGMv2_3075_14 | HRGMv2_3075_14_28 | 24236 | 25441 | + | ACT | ACT |
| TC | HRGMv2_3075_14 | HRGMv2_3075_14_29 | 25609 | 26310 | + | 3.A.1.122.7 |
Gene ID: HRGMv2_3075_14_26
Type: CAZyme
Location: 20328 - 22733 (+)
Type: CAZyme
Location: 20328 - 22733 (+)
Gene ID: HRGMv2_3075_14_27
Type: pfam
Location: 22909 - 24144 (+)
Type: pfam
Location: 22909 - 24144 (+)
Gene ID: HRGMv2_3075_14_28
Type: STP
Location: 24236 - 25441 (+)
Type: STP
Location: 24236 - 25441 (+)
Gene ID: HRGMv2_3075_14_29
Type: TC
Location: 25609 - 26310 (+)
Type: TC
Location: 25609 - 26310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.