Cluster: HRGMv2_3075_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3075
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3075_9 | HRGMv2_3075_9_41 | 47044 | 48315 | + | 2.A.49.9.2 |
| CAZyme | HRGMv2_3075_9 | HRGMv2_3075_9_42 | 48694 | 50121 | - | GT5 |
| pfam | HRGMv2_3075_9 | HRGMv2_3075_9_43 | 50137 | 51246 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3075_9 | HRGMv2_3075_9_44 | 51236 | 52447 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3075_9 | HRGMv2_3075_9_45 | 52558 | 54465 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_3075_9_41
Type: TC
Location: 47044 - 48315 (+)
Type: TC
Location: 47044 - 48315 (+)
Gene ID: HRGMv2_3075_9_42
Type: CAZyme
Location: 48694 - 50121 (-)
Type: CAZyme
Location: 48694 - 50121 (-)
Gene ID: HRGMv2_3075_9_43
Type: pfam
Location: 50137 - 51246 (-)
Type: pfam
Location: 50137 - 51246 (-)
Gene ID: HRGMv2_3075_9_44
Type: pfam
Location: 51236 - 52447 (-)
Type: pfam
Location: 51236 - 52447 (-)
Gene ID: HRGMv2_3075_9_45
Type: CAZyme
Location: 52558 - 54465 (-)
Type: CAZyme
Location: 52558 - 54465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.