Cluster: HRGMv2_3075_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3075_75 | HRGMv2_3075_75_2 | 1584 | 2708 | - | GT28 |
| pfam | HRGMv2_3075_75 | HRGMv2_3075_75_3 | 3115 | 4800 | + | VanW |
| TC | HRGMv2_3075_75 | HRGMv2_3075_75_4 | 4864 | 5874 | + | 9.A.11.1.1 |
| pfam | HRGMv2_3075_75 | HRGMv2_3075_75_5 | 5998 | 6531 | + | PAP2 | PAP2_3 |
| TF | HRGMv2_3075_75 | HRGMv2_3075_75_6 | 6651 | 7433 | + | HTH_3 |
| TC | HRGMv2_3075_75 | HRGMv2_3075_75_7 | 7750 | 10377 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_3075_75_2
Type: CAZyme
Location: 1584 - 2708 (-)
Type: CAZyme
Location: 1584 - 2708 (-)
Gene ID: HRGMv2_3075_75_3
Type: pfam
Location: 3115 - 4800 (+)
Type: pfam
Location: 3115 - 4800 (+)
Gene ID: HRGMv2_3075_75_4
Type: TC
Location: 4864 - 5874 (+)
Type: TC
Location: 4864 - 5874 (+)
Gene ID: HRGMv2_3075_75_5
Type: pfam
Location: 5998 - 6531 (+)
Type: pfam
Location: 5998 - 6531 (+)
Gene ID: HRGMv2_3075_75_6
Type: TF
Location: 6651 - 7433 (+)
Type: TF
Location: 6651 - 7433 (+)
Gene ID: HRGMv2_3075_75_7
Type: TC
Location: 7750 - 10377 (-)
Type: TC
Location: 7750 - 10377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.