Cluster: HRGMv2_3075_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3075_66 | HRGMv2_3075_66_2 | 771 | 1736 | + | 3.A.1.132.1 |
| TC | HRGMv2_3075_66 | HRGMv2_3075_66_3 | 1736 | 2440 | + | 3.A.1.132.1 |
| pfam | HRGMv2_3075_66 | HRGMv2_3075_66_4 | 2455 | 4068 | + | ABC_transp_aux | DUF7088 |
| pfam | HRGMv2_3075_66 | HRGMv2_3075_66_5 | 4044 | 5612 | + | DUF4340 | DUF4340 |
| CAZyme | HRGMv2_3075_66 | HRGMv2_3075_66_6 | 6103 | 7065 | + | GT2 |
Gene ID: HRGMv2_3075_66_2
Type: TC
Location: 771 - 1736 (+)
Type: TC
Location: 771 - 1736 (+)
Gene ID: HRGMv2_3075_66_3
Type: TC
Location: 1736 - 2440 (+)
Type: TC
Location: 1736 - 2440 (+)
Gene ID: HRGMv2_3075_66_4
Type: pfam
Location: 2455 - 4068 (+)
Type: pfam
Location: 2455 - 4068 (+)
Gene ID: HRGMv2_3075_66_5
Type: pfam
Location: 4044 - 5612 (+)
Type: pfam
Location: 4044 - 5612 (+)
Gene ID: HRGMv2_3075_66_6
Type: CAZyme
Location: 6103 - 7065 (+)
Type: CAZyme
Location: 6103 - 7065 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.