Cluster: HRGMv2_3075_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3075_63 | HRGMv2_3075_63_2 | 1663 | 2607 | - | GT2 |
| pfam | HRGMv2_3075_63 | HRGMv2_3075_63_3 | 2830 | 3798 | + | PFK |
| pfam | HRGMv2_3075_63 | HRGMv2_3075_63_4 | 3975 | 5495 | + | MORN | MORN |
| TC | HRGMv2_3075_63 | HRGMv2_3075_63_5 | 5499 | 6290 | + | 1.A.23.2.1 |
Gene ID: HRGMv2_3075_63_2
Type: CAZyme
Location: 1663 - 2607 (-)
Type: CAZyme
Location: 1663 - 2607 (-)
Gene ID: HRGMv2_3075_63_3
Type: pfam
Location: 2830 - 3798 (+)
Type: pfam
Location: 2830 - 3798 (+)
Gene ID: HRGMv2_3075_63_4
Type: pfam
Location: 3975 - 5495 (+)
Type: pfam
Location: 3975 - 5495 (+)
Gene ID: HRGMv2_3075_63_5
Type: TC
Location: 5499 - 6290 (+)
Type: TC
Location: 5499 - 6290 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp019415925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.