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Cluster: HRGMv2_3066_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3066_2 HRGMv2_3066_2_281 285248 286216 - 3.A.1.5.15
TC HRGMv2_3066_2 HRGMv2_3066_2_282 286213 287196 - 3.A.1.5.15
TC HRGMv2_3066_2 HRGMv2_3066_2_283 287210 288115 - 3.A.1.5.39
TC HRGMv2_3066_2 HRGMv2_3066_2_284 288129 289064 - 3.A.1.5.20
TC HRGMv2_3066_2 HRGMv2_3066_2_285 289152 290690 - 3.A.1.5.20
peptidase HRGMv2_3066_2 HRGMv2_3066_2_286 290765 291976 - M38.UNW
TF HRGMv2_3066_2 HRGMv2_3066_2_287 292232 292681 - MarR
CAZyme HRGMv2_3066_2 HRGMv2_3066_2_288 292900 300204 + GH94 | GT84
Gene ID: HRGMv2_3066_2_281
Type: TC
Location: 285248 - 286216 (-)
Gene ID: HRGMv2_3066_2_282
Type: TC
Location: 286213 - 287196 (-)
Gene ID: HRGMv2_3066_2_283
Type: TC
Location: 287210 - 288115 (-)
Gene ID: HRGMv2_3066_2_284
Type: TC
Location: 288129 - 289064 (-)
Gene ID: HRGMv2_3066_2_285
Type: TC
Location: 289152 - 290690 (-)
Gene ID: HRGMv2_3066_2_286
Type: peptidase
Location: 290765 - 291976 (-)
Gene ID: HRGMv2_3066_2_287
Type: TF
Location: 292232 - 292681 (-)
Gene ID: HRGMv2_3066_2_288
Type: CAZyme
Location: 292900 - 300204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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