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Cluster: HRGMv2_3066_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3066_2 HRGMv2_3066_2_198 209176 210411 - GT4
pfam HRGMv2_3066_2 HRGMv2_3066_2_199 210681 212132 + NAPRTase | NAPRTase_N | NAPRTase_C
TC HRGMv2_3066_2 HRGMv2_3066_2_200 212383 213639 + 3.A.1.4.6
TC HRGMv2_3066_2 HRGMv2_3066_2_201 213897 214778 + 3.A.1.4.10
TC HRGMv2_3066_2 HRGMv2_3066_2_202 214784 215935 + 3.A.1.4.10
TC HRGMv2_3066_2 HRGMv2_3066_2_203 215928 216770 + 3.A.1.4.10
TC HRGMv2_3066_2 HRGMv2_3066_2_204 216763 217470 + 3.A.1.4.10
Gene ID: HRGMv2_3066_2_198
Type: CAZyme
Location: 209176 - 210411 (-)
Gene ID: HRGMv2_3066_2_199
Type: pfam
Location: 210681 - 212132 (+)
Gene ID: HRGMv2_3066_2_200
Type: TC
Location: 212383 - 213639 (+)
Gene ID: HRGMv2_3066_2_201
Type: TC
Location: 213897 - 214778 (+)
Gene ID: HRGMv2_3066_2_202
Type: TC
Location: 214784 - 215935 (+)
Gene ID: HRGMv2_3066_2_203
Type: TC
Location: 215928 - 216770 (+)
Gene ID: HRGMv2_3066_2_204
Type: TC
Location: 216763 - 217470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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