Cluster: HRGMv2_3066_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3066
- CGC Family ID: CGCFAM_06202
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3066_1 | HRGMv2_3066_1_472 | 506728 | 509133 | + | GT35 |
| CAZyme | HRGMv2_3066_1 | HRGMv2_3066_1_473 | 509366 | 511228 | + | GH13_39 |
| TC | HRGMv2_3066_1 | HRGMv2_3066_1_474 | 511458 | 512141 | + | 3.A.1.122.2 |
| STP | HRGMv2_3066_1 | HRGMv2_3066_1_475 | 512232 | 512444 | + | Fer4 | Fer4 |
| NULL(UNKNOWN) | HRGMv2_3066_1 | HRGMv2_3066_1_476 | 512441 | 513028 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3066_1 | HRGMv2_3066_1_477 | 513168 | 514238 | + | GH25 |
Gene ID: HRGMv2_3066_1_472
Type: CAZyme
Location: 506728 - 509133 (+)
Type: CAZyme
Location: 506728 - 509133 (+)
Gene ID: HRGMv2_3066_1_473
Type: CAZyme
Location: 509366 - 511228 (+)
Type: CAZyme
Location: 509366 - 511228 (+)
Gene ID: HRGMv2_3066_1_474
Type: TC
Location: 511458 - 512141 (+)
Type: TC
Location: 511458 - 512141 (+)
Gene ID: HRGMv2_3066_1_475
Type: STP
Location: 512232 - 512444 (+)
Type: STP
Location: 512232 - 512444 (+)
Gene ID: HRGMv2_3066_1_476
Type:
Location: 512441 - 513028 (+)
Type:
Location: 512441 - 513028 (+)
Gene ID: HRGMv2_3066_1_477
Type: CAZyme
Location: 513168 - 514238 (+)
Type: CAZyme
Location: 513168 - 514238 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerotruncus
Species
Anaerotruncus colihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.