Cluster: HRGMv2_3047_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3047
- CGC Family ID: CGCFAM_10294
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3047_23 | HRGMv2_3047_23_1 | 395 | 1684 | - | GH109 |
| pfam | HRGMv2_3047_23 | HRGMv2_3047_23_2 | 1902 | 2615 | + | His_Phos_1 |
| TC | HRGMv2_3047_23 | HRGMv2_3047_23_3 | 2651 | 3232 | + | 2.A.107.1.2 |
Gene ID: HRGMv2_3047_23_1
Type: CAZyme
Location: 395 - 1684 (-)
Type: CAZyme
Location: 395 - 1684 (-)
Gene ID: HRGMv2_3047_23_2
Type: pfam
Location: 1902 - 2615 (+)
Type: pfam
Location: 1902 - 2615 (+)
Gene ID: HRGMv2_3047_23_3
Type: TC
Location: 2651 - 3232 (+)
Type: TC
Location: 2651 - 3232 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.