Cluster: HRGMv2_3047_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3047
- CGC Family ID: CGCFAM_06201
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3047_13 | HRGMv2_3047_13_22 | 21839 | 23305 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_3047_13 | HRGMv2_3047_13_23 | 23320 | 24759 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3047_13 | HRGMv2_3047_13_24 | 24843 | 26210 | - | 1.A.26.1.2 |
| CAZyme | HRGMv2_3047_13 | HRGMv2_3047_13_25 | 26401 | 27603 | + | GH109 |
Gene ID: HRGMv2_3047_13_22
Type: TC
Location: 21839 - 23305 (+)
Type: TC
Location: 21839 - 23305 (+)
Gene ID: HRGMv2_3047_13_23
Type:
Location: 23320 - 24759 (+)
Type:
Location: 23320 - 24759 (+)
Gene ID: HRGMv2_3047_13_24
Type: TC
Location: 24843 - 26210 (-)
Type: TC
Location: 24843 - 26210 (-)
Gene ID: HRGMv2_3047_13_25
Type: CAZyme
Location: 26401 - 27603 (+)
Type: CAZyme
Location: 26401 - 27603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.