Cluster: HRGMv2_3047_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3047
- CGC Family ID: CGCFAM_10293
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3047_3 | HRGMv2_3047_3_39 | 50139 | 50882 | + | CE1 |
| pfam | HRGMv2_3047_3 | HRGMv2_3047_3_40 | 51073 | 52716 | - | Cpn60_TCP1 |
| pfam | HRGMv2_3047_3 | HRGMv2_3047_3_41 | 52740 | 53024 | - | Cpn10 |
| TC | HRGMv2_3047_3 | HRGMv2_3047_3_42 | 53257 | 53892 | + | 2.A.25.1.9 |
| TC | HRGMv2_3047_3 | HRGMv2_3047_3_43 | 53962 | 54669 | + | 2.A.25.1.5 |
Gene ID: HRGMv2_3047_3_39
Type: CAZyme
Location: 50139 - 50882 (+)
Type: CAZyme
Location: 50139 - 50882 (+)
Gene ID: HRGMv2_3047_3_40
Type: pfam
Location: 51073 - 52716 (-)
Type: pfam
Location: 51073 - 52716 (-)
Gene ID: HRGMv2_3047_3_41
Type: pfam
Location: 52740 - 53024 (-)
Type: pfam
Location: 52740 - 53024 (-)
Gene ID: HRGMv2_3047_3_42
Type: TC
Location: 53257 - 53892 (+)
Type: TC
Location: 53257 - 53892 (+)
Gene ID: HRGMv2_3047_3_43
Type: TC
Location: 53962 - 54669 (+)
Type: TC
Location: 53962 - 54669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.