Cluster: HRGMv2_3047_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3047
- CGC Family ID: CGCFAM_02397
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3047_93 | HRGMv2_3047_93_3 | 2111 | 2905 | - | 3.A.1.34.1 |
| TC | HRGMv2_3047_93 | HRGMv2_3047_93_4 | 2898 | 3803 | - | 3.A.1.34.1 |
| pfam | HRGMv2_3047_93 | HRGMv2_3047_93_5 | 3873 | 4832 | - | ABC_sub_bind |
| CAZyme | HRGMv2_3047_93 | HRGMv2_3047_93_6 | 5284 | 6147 | + | CE4 |
| CAZyme | HRGMv2_3047_93 | HRGMv2_3047_93_7 | 6149 | 6463 | + | CE4 |
Gene ID: HRGMv2_3047_93_3
Type: TC
Location: 2111 - 2905 (-)
Type: TC
Location: 2111 - 2905 (-)
Gene ID: HRGMv2_3047_93_4
Type: TC
Location: 2898 - 3803 (-)
Type: TC
Location: 2898 - 3803 (-)
Gene ID: HRGMv2_3047_93_5
Type: pfam
Location: 3873 - 4832 (-)
Type: pfam
Location: 3873 - 4832 (-)
Gene ID: HRGMv2_3047_93_6
Type: CAZyme
Location: 5284 - 6147 (+)
Type: CAZyme
Location: 5284 - 6147 (+)
Gene ID: HRGMv2_3047_93_7
Type: CAZyme
Location: 6149 - 6463 (+)
Type: CAZyme
Location: 6149 - 6463 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.