Cluster: HRGMv2_3047_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3047
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3047_74 | HRGMv2_3047_74_2 | 1018 | 2112 | + | GT28 |
| NULL(UNKNOWN) | HRGMv2_3047_74 | HRGMv2_3047_74_3 | 2267 | 3346 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3047_74 | HRGMv2_3047_74_4 | 3425 | 4828 | + | 2.A.50.2.1 |
| pfam | HRGMv2_3047_74 | HRGMv2_3047_74_5 | 4907 | 6013 | + | DHHW |
| NULL(UNKNOWN) | HRGMv2_3047_74 | HRGMv2_3047_74_6 | 6185 | 6967 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3047_74 | HRGMv2_3047_74_7 | 6951 | 8924 | + | GH127 |
Gene ID: HRGMv2_3047_74_2
Type: CAZyme
Location: 1018 - 2112 (+)
Type: CAZyme
Location: 1018 - 2112 (+)
Gene ID: HRGMv2_3047_74_3
Type:
Location: 2267 - 3346 (+)
Type:
Location: 2267 - 3346 (+)
Gene ID: HRGMv2_3047_74_4
Type: TC
Location: 3425 - 4828 (+)
Type: TC
Location: 3425 - 4828 (+)
Gene ID: HRGMv2_3047_74_5
Type: pfam
Location: 4907 - 6013 (+)
Type: pfam
Location: 4907 - 6013 (+)
Gene ID: HRGMv2_3047_74_6
Type:
Location: 6185 - 6967 (+)
Type:
Location: 6185 - 6967 (+)
Gene ID: HRGMv2_3047_74_7
Type: CAZyme
Location: 6951 - 8924 (+)
Type: CAZyme
Location: 6951 - 8924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.