Cluster: HRGMv2_3047_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3047
- CGC Family ID: CGCFAM_08752
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3047_56 | HRGMv2_3047_56_1 | 56 | 1783 | + | 4.C.1.1.4 |
| pfam | HRGMv2_3047_56 | HRGMv2_3047_56_2 | 1832 | 2470 | - | LUD_dom |
| CAZyme | HRGMv2_3047_56 | HRGMv2_3047_56_3 | 2603 | 3856 | + | GH29 |
Gene ID: HRGMv2_3047_56_1
Type: TC
Location: 56 - 1783 (+)
Type: TC
Location: 56 - 1783 (+)
Gene ID: HRGMv2_3047_56_2
Type: pfam
Location: 1832 - 2470 (-)
Type: pfam
Location: 1832 - 2470 (-)
Gene ID: HRGMv2_3047_56_3
Type: CAZyme
Location: 2603 - 3856 (+)
Type: CAZyme
Location: 2603 - 3856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.