Cluster: HRGMv2_3047_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3047
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3047_55 | HRGMv2_3047_55_5 | 6487 | 7095 | + | 4.F.1.1.7 |
| pfam | HRGMv2_3047_55 | HRGMv2_3047_55_6 | 7109 | 8839 | + | Lactamase_B |
| pfam | HRGMv2_3047_55 | HRGMv2_3047_55_7 | 8856 | 9599 | + | Abhydrolase_1 | Abhydrolase_6 |
| TC | HRGMv2_3047_55 | HRGMv2_3047_55_8 | 9766 | 11724 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_3047_55 | HRGMv2_3047_55_9 | 11745 | 12854 | + | GH1 |
Gene ID: HRGMv2_3047_55_5
Type: TC
Location: 6487 - 7095 (+)
Type: TC
Location: 6487 - 7095 (+)
Gene ID: HRGMv2_3047_55_6
Type: pfam
Location: 7109 - 8839 (+)
Type: pfam
Location: 7109 - 8839 (+)
Gene ID: HRGMv2_3047_55_7
Type: pfam
Location: 8856 - 9599 (+)
Type: pfam
Location: 8856 - 9599 (+)
Gene ID: HRGMv2_3047_55_8
Type: TC
Location: 9766 - 11724 (+)
Type: TC
Location: 9766 - 11724 (+)
Gene ID: HRGMv2_3047_55_9
Type: CAZyme
Location: 11745 - 12854 (+)
Type: CAZyme
Location: 11745 - 12854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
RGIG3947
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.