Cluster: HRGMv2_3046_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3046
- CGC Family ID: CGCFAM_01547
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3046_12 | HRGMv2_3046_12_58 | 34373 | 35743 | - | 2.A.66.1.33 |
| pfam | HRGMv2_3046_12 | HRGMv2_3046_12_59 | 36086 | 36352 | + | SpoIIID |
| TC | HRGMv2_3046_12 | HRGMv2_3046_12_60 | 36402 | 36977 | - | 2.A.51.1.6 |
| TC | HRGMv2_3046_12 | HRGMv2_3046_12_61 | 36974 | 37516 | - | 2.A.51.1.6 |
| CAZyme | HRGMv2_3046_12 | HRGMv2_3046_12_62 | 38125 | 39060 | - | CE4 |
Gene ID: HRGMv2_3046_12_58
Type: TC
Location: 34373 - 35743 (-)
Type: TC
Location: 34373 - 35743 (-)
Gene ID: HRGMv2_3046_12_59
Type: pfam
Location: 36086 - 36352 (+)
Type: pfam
Location: 36086 - 36352 (+)
Gene ID: HRGMv2_3046_12_60
Type: TC
Location: 36402 - 36977 (-)
Type: TC
Location: 36402 - 36977 (-)
Gene ID: HRGMv2_3046_12_61
Type: TC
Location: 36974 - 37516 (-)
Type: TC
Location: 36974 - 37516 (-)
Gene ID: HRGMv2_3046_12_62
Type: CAZyme
Location: 38125 - 39060 (-)
Type: CAZyme
Location: 38125 - 39060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp900552845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.