Cluster: HRGMv2_3046_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3046
- CGC Family ID: CGCFAM_04927
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3046_6 | HRGMv2_3046_6_69 | 65864 | 67201 | - | GH30_1 |
| CAZyme | HRGMv2_3046_6 | HRGMv2_3046_6_70 | 67215 | 68561 | - | GH30_2 |
| TC | HRGMv2_3046_6 | HRGMv2_3046_6_71 | 68574 | 69401 | - | 3.A.1.1.34 |
| TC | HRGMv2_3046_6 | HRGMv2_3046_6_72 | 69401 | 70309 | - | 3.A.1.1.4 |
| STP | HRGMv2_3046_6 | HRGMv2_3046_6_73 | 70368 | 71645 | - | SBP_bac_1 |
| TF | HRGMv2_3046_6 | HRGMv2_3046_6_74 | 71692 | 72669 | - | LacI |
| TC | HRGMv2_3046_6 | HRGMv2_3046_6_75 | 73099 | 73875 | - | 2.A.5.5.2 |
Gene ID: HRGMv2_3046_6_69
Type: CAZyme
Location: 65864 - 67201 (-)
Type: CAZyme
Location: 65864 - 67201 (-)
Gene ID: HRGMv2_3046_6_70
Type: CAZyme
Location: 67215 - 68561 (-)
Type: CAZyme
Location: 67215 - 68561 (-)
Gene ID: HRGMv2_3046_6_71
Type: TC
Location: 68574 - 69401 (-)
Type: TC
Location: 68574 - 69401 (-)
Gene ID: HRGMv2_3046_6_72
Type: TC
Location: 69401 - 70309 (-)
Type: TC
Location: 69401 - 70309 (-)
Gene ID: HRGMv2_3046_6_73
Type: STP
Location: 70368 - 71645 (-)
Type: STP
Location: 70368 - 71645 (-)
Gene ID: HRGMv2_3046_6_74
Type: TF
Location: 71692 - 72669 (-)
Type: TF
Location: 71692 - 72669 (-)
Gene ID: HRGMv2_3046_6_75
Type: TC
Location: 73099 - 73875 (-)
Type: TC
Location: 73099 - 73875 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp900552845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.