Cluster: HRGMv2_3046_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3046
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3046_5 | HRGMv2_3046_5_73 | 67666 | 70233 | - | 3.A.3.5.15 |
| TC | HRGMv2_3046_5 | HRGMv2_3046_5_74 | 70540 | 71838 | + | 3.A.1.1.45 |
| TC | HRGMv2_3046_5 | HRGMv2_3046_5_75 | 72076 | 72993 | + | 3.A.1.1.45 |
| TC | HRGMv2_3046_5 | HRGMv2_3046_5_76 | 72993 | 73877 | + | 3.A.1.1.45 |
| TF | HRGMv2_3046_5 | HRGMv2_3046_5_77 | 73888 | 74901 | + | LacI |
| CAZyme | HRGMv2_3046_5 | HRGMv2_3046_5_78 | 74949 | 76433 | + | GH77 |
Gene ID: HRGMv2_3046_5_73
Type: TC
Location: 67666 - 70233 (-)
Type: TC
Location: 67666 - 70233 (-)
Gene ID: HRGMv2_3046_5_74
Type: TC
Location: 70540 - 71838 (+)
Type: TC
Location: 70540 - 71838 (+)
Gene ID: HRGMv2_3046_5_75
Type: TC
Location: 72076 - 72993 (+)
Type: TC
Location: 72076 - 72993 (+)
Gene ID: HRGMv2_3046_5_76
Type: TC
Location: 72993 - 73877 (+)
Type: TC
Location: 72993 - 73877 (+)
Gene ID: HRGMv2_3046_5_77
Type: TF
Location: 73888 - 74901 (+)
Type: TF
Location: 73888 - 74901 (+)
Gene ID: HRGMv2_3046_5_78
Type: CAZyme
Location: 74949 - 76433 (+)
Type: CAZyme
Location: 74949 - 76433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp900552845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3046_5_74 | vegetarian > vegan | 1.07905 | 0.00454 |
| HRGMv2_3046_5_76 | vegetarian > vegan | 1.06155 | 0.00454 |