Cluster: HRGMv2_3046_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3046
- CGC Family ID: CGCFAM_00849
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3046_5 | HRGMv2_3046_5_33 | 29599 | 30501 | + | CE4 |
| TF | HRGMv2_3046_5 | HRGMv2_3046_5_34 | 30715 | 31089 | + | GntR |
| TC | HRGMv2_3046_5 | HRGMv2_3046_5_35 | 31083 | 31979 | + | 3.A.1.147.9 |
Gene ID: HRGMv2_3046_5_33
Type: CAZyme
Location: 29599 - 30501 (+)
Type: CAZyme
Location: 29599 - 30501 (+)
Gene ID: HRGMv2_3046_5_34
Type: TF
Location: 30715 - 31089 (+)
Type: TF
Location: 30715 - 31089 (+)
Gene ID: HRGMv2_3046_5_35
Type: TC
Location: 31083 - 31979 (+)
Type: TC
Location: 31083 - 31979 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp900552845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.