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Cluster: HRGMv2_3046_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3046_18 HRGMv2_3046_18_6 5413 6963 + 2.A.21.2.5
pfam HRGMv2_3046_18 HRGMv2_3046_18_7 7130 8173 + GDPD
pfam HRGMv2_3046_18 HRGMv2_3046_18_8 8247 8927 + PNP_UDP_1
TC HRGMv2_3046_18 HRGMv2_3046_18_9 9149 10105 + 3.A.1.5.20
TC HRGMv2_3046_18 HRGMv2_3046_18_10 10120 11010 + 3.A.1.5.39
TC HRGMv2_3046_18 HRGMv2_3046_18_11 11023 13071 + 3.A.1.5.11
TC HRGMv2_3046_18 HRGMv2_3046_18_12 13118 14683 + 3.A.1.5.11
TF HRGMv2_3046_18 HRGMv2_3046_18_13 14751 15875 + HTH_11
pfam HRGMv2_3046_18 HRGMv2_3046_18_14 15898 16839 + Mem_trans | Mem_trans
CAZyme HRGMv2_3046_18 HRGMv2_3046_18_15 16872 18332 + CE1
pfam HRGMv2_3046_18 HRGMv2_3046_18_16 18489 19445 - adh_short | KR | adh_short_C2
STP HRGMv2_3046_18 HRGMv2_3046_18_17 19599 20753 - Fer4
TC HRGMv2_3046_18 HRGMv2_3046_18_18 20863 22176 - 2.A.35.1.5
TC HRGMv2_3046_18 HRGMv2_3046_18_19 22348 23796 - 2.A.38.1.1
Gene ID: HRGMv2_3046_18_6
Type: TC
Location: 5413 - 6963 (+)
Gene ID: HRGMv2_3046_18_7
Type: pfam
Location: 7130 - 8173 (+)
Gene ID: HRGMv2_3046_18_8
Type: pfam
Location: 8247 - 8927 (+)
Gene ID: HRGMv2_3046_18_9
Type: TC
Location: 9149 - 10105 (+)
Gene ID: HRGMv2_3046_18_10
Type: TC
Location: 10120 - 11010 (+)
Gene ID: HRGMv2_3046_18_11
Type: TC
Location: 11023 - 13071 (+)
Gene ID: HRGMv2_3046_18_12
Type: TC
Location: 13118 - 14683 (+)
Gene ID: HRGMv2_3046_18_13
Type: TF
Location: 14751 - 15875 (+)
Gene ID: HRGMv2_3046_18_14
Type: pfam
Location: 15898 - 16839 (+)
Gene ID: HRGMv2_3046_18_15
Type: CAZyme
Location: 16872 - 18332 (+)
Gene ID: HRGMv2_3046_18_16
Type: pfam
Location: 18489 - 19445 (-)
Gene ID: HRGMv2_3046_18_17
Type: STP
Location: 19599 - 20753 (-)
Gene ID: HRGMv2_3046_18_18
Type: TC
Location: 20863 - 22176 (-)
Gene ID: HRGMv2_3046_18_19
Type: TC
Location: 22348 - 23796 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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