Cluster: HRGMv2_3039_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3039
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3039_42 | HRGMv2_3039_42_1 | 2 | 796 | - | CBM67 |
| CAZyme | HRGMv2_3039_42 | HRGMv2_3039_42_2 | 787 | 3063 | - | CBM67 | GH78 |
| TF | HRGMv2_3039_42 | HRGMv2_3039_42_3 | 3111 | 4139 | - | LacI |
| CAZyme | HRGMv2_3039_42 | HRGMv2_3039_42_4 | 4376 | 6865 | - | GH2 |
| TC | HRGMv2_3039_42 | HRGMv2_3039_42_5 | 6904 | 7893 | - | 3.A.1.1.24 |
| TC | HRGMv2_3039_42 | HRGMv2_3039_42_6 | 7915 | 8823 | - | 3.A.1.1.34 |
| pfam | HRGMv2_3039_42 | HRGMv2_3039_42_7 | 8875 | 10152 | - | DUF5696 |
| TC | HRGMv2_3039_42 | HRGMv2_3039_42_8 | 10249 | 11634 | - | 2.A.25.1.3 |
Gene ID: HRGMv2_3039_42_1
Type: CAZyme
Location: 2 - 796 (-)
Type: CAZyme
Location: 2 - 796 (-)
Gene ID: HRGMv2_3039_42_2
Type: CAZyme
Location: 787 - 3063 (-)
Type: CAZyme
Location: 787 - 3063 (-)
Gene ID: HRGMv2_3039_42_3
Type: TF
Location: 3111 - 4139 (-)
Type: TF
Location: 3111 - 4139 (-)
Gene ID: HRGMv2_3039_42_4
Type: CAZyme
Location: 4376 - 6865 (-)
Type: CAZyme
Location: 4376 - 6865 (-)
Gene ID: HRGMv2_3039_42_5
Type: TC
Location: 6904 - 7893 (-)
Type: TC
Location: 6904 - 7893 (-)
Gene ID: HRGMv2_3039_42_6
Type: TC
Location: 7915 - 8823 (-)
Type: TC
Location: 7915 - 8823 (-)
Gene ID: HRGMv2_3039_42_7
Type: pfam
Location: 8875 - 10152 (-)
Type: pfam
Location: 8875 - 10152 (-)
Gene ID: HRGMv2_3039_42_8
Type: TC
Location: 10249 - 11634 (-)
Type: TC
Location: 10249 - 11634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1591
Species
UMGS1591 sp900553255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.