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Cluster: HRGMv2_3039_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3039_34 HRGMv2_3039_34_2 386 1294 - 3.A.1.1.27
TC HRGMv2_3039_34 HRGMv2_3039_34_3 1291 2163 - 3.A.1.1.11
pfam HRGMv2_3039_34 HRGMv2_3039_34_4 2167 4440 - DUF5696
pfam HRGMv2_3039_34 HRGMv2_3039_34_5 4427 6511 - Yip1
TC HRGMv2_3039_34 HRGMv2_3039_34_6 6549 7442 - 3.A.1.1.36
TC HRGMv2_3039_34 HRGMv2_3039_34_7 7451 8368 - 3.A.1.1.29
STP HRGMv2_3039_34 HRGMv2_3039_34_8 8373 11267 - SBP_bac_1
CAZyme HRGMv2_3039_34 HRGMv2_3039_34_9 11301 14279 - GH31
Gene ID: HRGMv2_3039_34_2
Type: TC
Location: 386 - 1294 (-)
Gene ID: HRGMv2_3039_34_3
Type: TC
Location: 1291 - 2163 (-)
Gene ID: HRGMv2_3039_34_4
Type: pfam
Location: 2167 - 4440 (-)
Gene ID: HRGMv2_3039_34_5
Type: pfam
Location: 4427 - 6511 (-)
Gene ID: HRGMv2_3039_34_6
Type: TC
Location: 6549 - 7442 (-)
Gene ID: HRGMv2_3039_34_7
Type: TC
Location: 7451 - 8368 (-)
Gene ID: HRGMv2_3039_34_8
Type: STP
Location: 8373 - 11267 (-)
Gene ID: HRGMv2_3039_34_9
Type: CAZyme
Location: 11301 - 14279 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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