Cluster: HRGMv2_3039_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3039
- CGC Family ID: CGCFAM_02975
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3039_14 | HRGMv2_3039_14_2 | 930 | 2297 | + | 2.A.66.1.32 |
| CAZyme | HRGMv2_3039_14 | HRGMv2_3039_14_3 | 2355 | 3674 | + | GH3 |
| TC | HRGMv2_3039_14 | HRGMv2_3039_14_4 | 3829 | 5577 | + | 1.A.11.2.3 |
| CAZyme | HRGMv2_3039_14 | HRGMv2_3039_14_5 | 5848 | 6615 | - | GT2 |
| CAZyme | HRGMv2_3039_14 | HRGMv2_3039_14_6 | 6631 | 7758 | - | GT4 |
| pfam | HRGMv2_3039_14 | HRGMv2_3039_14_7 | 8022 | 8897 | - | R3H | KH_KhpA-B | Jag_N |
| TC | HRGMv2_3039_14 | HRGMv2_3039_14_8 | 8986 | 10233 | - | 2.A.9.3.7 |
Gene ID: HRGMv2_3039_14_2
Type: TC
Location: 930 - 2297 (+)
Type: TC
Location: 930 - 2297 (+)
Gene ID: HRGMv2_3039_14_3
Type: CAZyme
Location: 2355 - 3674 (+)
Type: CAZyme
Location: 2355 - 3674 (+)
Gene ID: HRGMv2_3039_14_4
Type: TC
Location: 3829 - 5577 (+)
Type: TC
Location: 3829 - 5577 (+)
Gene ID: HRGMv2_3039_14_5
Type: CAZyme
Location: 5848 - 6615 (-)
Type: CAZyme
Location: 5848 - 6615 (-)
Gene ID: HRGMv2_3039_14_6
Type: CAZyme
Location: 6631 - 7758 (-)
Type: CAZyme
Location: 6631 - 7758 (-)
Gene ID: HRGMv2_3039_14_7
Type: pfam
Location: 8022 - 8897 (-)
Type: pfam
Location: 8022 - 8897 (-)
Gene ID: HRGMv2_3039_14_8
Type: TC
Location: 8986 - 10233 (-)
Type: TC
Location: 8986 - 10233 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1591
Species
UMGS1591 sp900553255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.