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Cluster: HRGMv2_3039_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3039_43 HRGMv2_3039_43_10 7911 8675 + 3.A.1.134.4
TC HRGMv2_3039_43 HRGMv2_3039_43_11 8672 10726 + 3.A.1.134.4
NULL(UNKNOWN) HRGMv2_3039_43 HRGMv2_3039_43_12 10723 11220 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3039_43 HRGMv2_3039_43_13 11220 11453 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3039_43 HRGMv2_3039_43_14 11599 12321 + GT51
TF HRGMv2_3039_43 HRGMv2_3039_43_15 12446 12649 + HTH_3
NULL(UNKNOWN) HRGMv2_3039_43 HRGMv2_3039_43_16 12646 13071 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3039_43 HRGMv2_3039_43_17 13087 13794 + 3.A.1.147.2
Gene ID: HRGMv2_3039_43_10
Type: TC
Location: 7911 - 8675 (+)
Gene ID: HRGMv2_3039_43_11
Type: TC
Location: 8672 - 10726 (+)
Gene ID: HRGMv2_3039_43_12
Type:
Location: 10723 - 11220 (+)
Gene ID: HRGMv2_3039_43_13
Type:
Location: 11220 - 11453 (+)
Gene ID: HRGMv2_3039_43_14
Type: CAZyme
Location: 11599 - 12321 (+)
Gene ID: HRGMv2_3039_43_15
Type: TF
Location: 12446 - 12649 (+)
Gene ID: HRGMv2_3039_43_16
Type:
Location: 12646 - 13071 (+)
Gene ID: HRGMv2_3039_43_17
Type: TC
Location: 13087 - 13794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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