Cluster: HRGMv2_3039_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3039
- CGC Family ID: CGCFAM_09031
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3039_3 | HRGMv2_3039_3_14 | 20520 | 21446 | + | 3.A.1.1.39 |
| pfam | HRGMv2_3039_3 | HRGMv2_3039_3_15 | 21462 | 23570 | + | Yip1 |
| pfam | HRGMv2_3039_3 | HRGMv2_3039_3_16 | 23590 | 25851 | + | DUF5696 |
| TC | HRGMv2_3039_3 | HRGMv2_3039_3_17 | 25853 | 26758 | + | 3.A.1.1.11 |
| TC | HRGMv2_3039_3 | HRGMv2_3039_3_18 | 26774 | 27796 | + | 3.A.1.1.20 |
| CAZyme | HRGMv2_3039_3 | HRGMv2_3039_3_19 | 27830 | 29671 | + | CBM23 |
Gene ID: HRGMv2_3039_3_14
Type: TC
Location: 20520 - 21446 (+)
Type: TC
Location: 20520 - 21446 (+)
Gene ID: HRGMv2_3039_3_15
Type: pfam
Location: 21462 - 23570 (+)
Type: pfam
Location: 21462 - 23570 (+)
Gene ID: HRGMv2_3039_3_16
Type: pfam
Location: 23590 - 25851 (+)
Type: pfam
Location: 23590 - 25851 (+)
Gene ID: HRGMv2_3039_3_17
Type: TC
Location: 25853 - 26758 (+)
Type: TC
Location: 25853 - 26758 (+)
Gene ID: HRGMv2_3039_3_18
Type: TC
Location: 26774 - 27796 (+)
Type: TC
Location: 26774 - 27796 (+)
Gene ID: HRGMv2_3039_3_19
Type: CAZyme
Location: 27830 - 29671 (+)
Type: CAZyme
Location: 27830 - 29671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1591
Species
UMGS1591 sp900553255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.