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Cluster: HRGMv2_3037_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3037_6 HRGMv2_3037_6_143 151125 154085 + GH3
TC HRGMv2_3037_6 HRGMv2_3037_6_144 154172 155824 - 8.A.7.1.1
STP HRGMv2_3037_6 HRGMv2_3037_6_145 155896 156156 - PTS-HPr
pfam HRGMv2_3037_6 HRGMv2_3037_6_146 156189 157034 - PRD | PRD | CAT_RBD
TC HRGMv2_3037_6 HRGMv2_3037_6_147 157071 159209 - 4.A.1.1.9
CAZyme HRGMv2_3037_6 HRGMv2_3037_6_148 159530 162580 - GH3
pfam HRGMv2_3037_6 HRGMv2_3037_6_149 162613 163947 - HATPase_c_5
TF HRGMv2_3037_6 HRGMv2_3037_6_150 163947 164654 - LytTR
CAZyme HRGMv2_3037_6 HRGMv2_3037_6_151 165032 167563 + GH3
CAZyme HRGMv2_3037_6 HRGMv2_3037_6_152 167713 170637 + GH3
TC HRGMv2_3037_6 HRGMv2_3037_6_153 170695 172167 - 3.A.10.1.13
Gene ID: HRGMv2_3037_6_143
Type: CAZyme
Location: 151125 - 154085 (+)
Gene ID: HRGMv2_3037_6_144
Type: TC
Location: 154172 - 155824 (-)
Gene ID: HRGMv2_3037_6_145
Type: STP
Location: 155896 - 156156 (-)
Gene ID: HRGMv2_3037_6_146
Type: pfam
Location: 156189 - 157034 (-)
Gene ID: HRGMv2_3037_6_147
Type: TC
Location: 157071 - 159209 (-)
Gene ID: HRGMv2_3037_6_148
Type: CAZyme
Location: 159530 - 162580 (-)
Gene ID: HRGMv2_3037_6_149
Type: pfam
Location: 162613 - 163947 (-)
Gene ID: HRGMv2_3037_6_150
Type: TF
Location: 163947 - 164654 (-)
Gene ID: HRGMv2_3037_6_151
Type: CAZyme
Location: 165032 - 167563 (+)
Gene ID: HRGMv2_3037_6_152
Type: CAZyme
Location: 167713 - 170637 (+)
Gene ID: HRGMv2_3037_6_153
Type: TC
Location: 170695 - 172167 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3037_6_147 vegan > omnivore 1.11070 0.01057

🧭 Explore Read Mapping of CGC

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