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Cluster: HRGMv2_3037_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3037_3 HRGMv2_3037_3_105 126324 127730 + 2.A.40.2.1
pfam HRGMv2_3037_3 HRGMv2_3037_3_106 127812 128480 - DUF624
TC HRGMv2_3037_3 HRGMv2_3037_3_107 128936 130231 + 3.A.1.1.44
TC HRGMv2_3037_3 HRGMv2_3037_3_108 130248 131153 + 3.A.1.1.11
TC HRGMv2_3037_3 HRGMv2_3037_3_109 131166 132005 + 3.A.1.1.34
CAZyme HRGMv2_3037_3 HRGMv2_3037_3_110 132087 134264 + GH36
TF HRGMv2_3037_3 HRGMv2_3037_3_111 134292 135149 - HTH_AraC | HTH_AraC
STP HRGMv2_3037_3 HRGMv2_3037_3_112 135257 136213 + PfkB
CAZyme HRGMv2_3037_3 HRGMv2_3037_3_113 136218 138056 + GH13_4
CAZyme HRGMv2_3037_3 HRGMv2_3037_3_114 138623 143665 + GH31
Gene ID: HRGMv2_3037_3_105
Type: TC
Location: 126324 - 127730 (+)
Gene ID: HRGMv2_3037_3_106
Type: pfam
Location: 127812 - 128480 (-)
Gene ID: HRGMv2_3037_3_107
Type: TC
Location: 128936 - 130231 (+)
Gene ID: HRGMv2_3037_3_108
Type: TC
Location: 130248 - 131153 (+)
Gene ID: HRGMv2_3037_3_109
Type: TC
Location: 131166 - 132005 (+)
Gene ID: HRGMv2_3037_3_110
Type: CAZyme
Location: 132087 - 134264 (+)
Gene ID: HRGMv2_3037_3_111
Type: TF
Location: 134292 - 135149 (-)
Gene ID: HRGMv2_3037_3_112
Type: STP
Location: 135257 - 136213 (+)
Gene ID: HRGMv2_3037_3_113
Type: CAZyme
Location: 136218 - 138056 (+)
Gene ID: HRGMv2_3037_3_114
Type: CAZyme
Location: 138623 - 143665 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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