Cluster: HRGMv2_3037_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- CGC Family ID: CGCFAM_04039
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_3 | HRGMv2_3037_3_73 | 84305 | 85186 | + | 3.A.1.1.38 |
| TC | HRGMv2_3037_3 | HRGMv2_3037_3_74 | 85198 | 86025 | + | 3.A.1.1.25 |
| CAZyme | HRGMv2_3037_3 | HRGMv2_3037_3_75 | 86030 | 88132 | + | CBM66 |
Gene ID: HRGMv2_3037_3_73
Type: TC
Location: 84305 - 85186 (+)
Type: TC
Location: 84305 - 85186 (+)
Gene ID: HRGMv2_3037_3_74
Type: TC
Location: 85198 - 86025 (+)
Type: TC
Location: 85198 - 86025 (+)
Gene ID: HRGMv2_3037_3_75
Type: CAZyme
Location: 86030 - 88132 (+)
Type: CAZyme
Location: 86030 - 88132 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.