Cluster: HRGMv2_3037_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- CGC Family ID: CGCFAM_02506
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_3 | HRGMv2_3037_3_63 | 73112 | 74731 | - | 8.A.7.1.1 |
| STP | HRGMv2_3037_3 | HRGMv2_3037_3_64 | 74750 | 75007 | - | PTS-HPr |
| TC | HRGMv2_3037_3 | HRGMv2_3037_3_65 | 75044 | 75580 | - | 4.A.1.2.2 |
| STP | HRGMv2_3037_3 | HRGMv2_3037_3_66 | 76087 | 76983 | + | SIS |
| TC | HRGMv2_3037_3 | HRGMv2_3037_3_67 | 77094 | 78551 | + | 4.A.1.2.7 |
| CAZyme | HRGMv2_3037_3 | HRGMv2_3037_3_68 | 78535 | 79590 | + | GH170 |
Gene ID: HRGMv2_3037_3_63
Type: TC
Location: 73112 - 74731 (-)
Type: TC
Location: 73112 - 74731 (-)
Gene ID: HRGMv2_3037_3_64
Type: STP
Location: 74750 - 75007 (-)
Type: STP
Location: 74750 - 75007 (-)
Gene ID: HRGMv2_3037_3_65
Type: TC
Location: 75044 - 75580 (-)
Type: TC
Location: 75044 - 75580 (-)
Gene ID: HRGMv2_3037_3_66
Type: STP
Location: 76087 - 76983 (+)
Type: STP
Location: 76087 - 76983 (+)
Gene ID: HRGMv2_3037_3_67
Type: TC
Location: 77094 - 78551 (+)
Type: TC
Location: 77094 - 78551 (+)
Gene ID: HRGMv2_3037_3_68
Type: CAZyme
Location: 78535 - 79590 (+)
Type: CAZyme
Location: 78535 - 79590 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.