Cluster: HRGMv2_3037_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_2 | HRGMv2_3037_2_118 | 135677 | 135955 | + | 4.A.5.1.2 |
| TC | HRGMv2_3037_2 | HRGMv2_3037_2_119 | 135976 | 137394 | + | 4.A.5.1.4 |
| pfam | HRGMv2_3037_2 | HRGMv2_3037_2_120 | 137518 | 139752 | + | DUF6273 |
| CAZyme | HRGMv2_3037_2 | HRGMv2_3037_2_121 | 139803 | 143720 | - | GH31 |
Gene ID: HRGMv2_3037_2_118
Type: TC
Location: 135677 - 135955 (+)
Type: TC
Location: 135677 - 135955 (+)
Gene ID: HRGMv2_3037_2_119
Type: TC
Location: 135976 - 137394 (+)
Type: TC
Location: 135976 - 137394 (+)
Gene ID: HRGMv2_3037_2_120
Type: pfam
Location: 137518 - 139752 (+)
Type: pfam
Location: 137518 - 139752 (+)
Gene ID: HRGMv2_3037_2_121
Type: CAZyme
Location: 139803 - 143720 (-)
Type: CAZyme
Location: 139803 - 143720 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.