dbCAN Logo

Cluster: HRGMv2_3037_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3037_21 HRGMv2_3037_21_9 8472 11165 - GH3
TC HRGMv2_3037_21 HRGMv2_3037_21_10 11197 12153 - 3.A.1.2.18
TC HRGMv2_3037_21 HRGMv2_3037_21_11 12158 13276 - 3.A.1.2.17
TC HRGMv2_3037_21 HRGMv2_3037_21_12 13269 14822 - 3.A.1.2.17
TC HRGMv2_3037_21 HRGMv2_3037_21_13 14946 16040 - 3.A.1.2.17
TF HRGMv2_3037_21 HRGMv2_3037_21_14 16339 17355 + LacI
pfam HRGMv2_3037_21 HRGMv2_3037_21_15 17430 19094 - FTHFS
TC HRGMv2_3037_21 HRGMv2_3037_21_16 19624 20745 + 3.A.1.1.22
Gene ID: HRGMv2_3037_21_9
Type: CAZyme
Location: 8472 - 11165 (-)
Gene ID: HRGMv2_3037_21_10
Type: TC
Location: 11197 - 12153 (-)
Gene ID: HRGMv2_3037_21_11
Type: TC
Location: 12158 - 13276 (-)
Gene ID: HRGMv2_3037_21_12
Type: TC
Location: 13269 - 14822 (-)
Gene ID: HRGMv2_3037_21_13
Type: TC
Location: 14946 - 16040 (-)
Gene ID: HRGMv2_3037_21_14
Type: TF
Location: 16339 - 17355 (+)
Gene ID: HRGMv2_3037_21_15
Type: pfam
Location: 17430 - 19094 (-)
Gene ID: HRGMv2_3037_21_16
Type: TC
Location: 19624 - 20745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List