Cluster: HRGMv2_3037_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_19 | HRGMv2_3037_19_31 | 33107 | 33991 | + | 3.A.1.1.18 |
| TC | HRGMv2_3037_19 | HRGMv2_3037_19_32 | 34008 | 34889 | + | 3.A.1.1.25 |
| pfam | HRGMv2_3037_19 | HRGMv2_3037_19_33 | 34899 | 35114 | + | DUF6903 |
| CAZyme | HRGMv2_3037_19 | HRGMv2_3037_19_34 | 35128 | 37299 | + | GH112 |
Gene ID: HRGMv2_3037_19_31
Type: TC
Location: 33107 - 33991 (+)
Type: TC
Location: 33107 - 33991 (+)
Gene ID: HRGMv2_3037_19_32
Type: TC
Location: 34008 - 34889 (+)
Type: TC
Location: 34008 - 34889 (+)
Gene ID: HRGMv2_3037_19_33
Type: pfam
Location: 34899 - 35114 (+)
Type: pfam
Location: 34899 - 35114 (+)
Gene ID: HRGMv2_3037_19_34
Type: CAZyme
Location: 35128 - 37299 (+)
Type: CAZyme
Location: 35128 - 37299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.