Cluster: HRGMv2_3037_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- CGC Family ID: CGCFAM_00834
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_1 | HRGMv2_3037_1_239 | 231660 | 232472 | - | 3.A.1.1.41 |
| TC | HRGMv2_3037_1 | HRGMv2_3037_1_240 | 232465 | 233367 | - | 3.A.1.1.28 |
| TC | HRGMv2_3037_1 | HRGMv2_3037_1_241 | 233481 | 234842 | - | 3.A.1.1.41 |
| CAZyme | HRGMv2_3037_1 | HRGMv2_3037_1_242 | 234910 | 235959 | - | GH179 |
Gene ID: HRGMv2_3037_1_239
Type: TC
Location: 231660 - 232472 (-)
Type: TC
Location: 231660 - 232472 (-)
Gene ID: HRGMv2_3037_1_240
Type: TC
Location: 232465 - 233367 (-)
Type: TC
Location: 232465 - 233367 (-)
Gene ID: HRGMv2_3037_1_241
Type: TC
Location: 233481 - 234842 (-)
Type: TC
Location: 233481 - 234842 (-)
Gene ID: HRGMv2_3037_1_242
Type: CAZyme
Location: 234910 - 235959 (-)
Type: CAZyme
Location: 234910 - 235959 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.