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Cluster: HRGMv2_3037_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3037_16 HRGMv2_3037_16_72 72628 74628 + CBM48 | GH13_9
pfam HRGMv2_3037_16 HRGMv2_3037_16_73 74722 75936 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3037_16 HRGMv2_3037_16_74 75933 77051 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3037_16 HRGMv2_3037_16_75 77182 78618 + GT5
CAZyme HRGMv2_3037_16 HRGMv2_3037_16_76 78758 81196 + GT35
pfam HRGMv2_3037_16 HRGMv2_3037_16_77 81353 82489 + Aminotran_5
TC HRGMv2_3037_16 HRGMv2_3037_16_78 82517 83920 + 2.A.66.1.45
Gene ID: HRGMv2_3037_16_72
Type: CAZyme
Location: 72628 - 74628 (+)
Gene ID: HRGMv2_3037_16_73
Type: pfam
Location: 74722 - 75936 (+)
Gene ID: HRGMv2_3037_16_74
Type: pfam
Location: 75933 - 77051 (+)
Gene ID: HRGMv2_3037_16_75
Type: CAZyme
Location: 77182 - 78618 (+)
Gene ID: HRGMv2_3037_16_76
Type: CAZyme
Location: 78758 - 81196 (+)
Gene ID: HRGMv2_3037_16_77
Type: pfam
Location: 81353 - 82489 (+)
Gene ID: HRGMv2_3037_16_78
Type: TC
Location: 82517 - 83920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3037_16_73 vegetarian > vegan 1.00431 0.01560

🧭 Explore Read Mapping of CGC

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