Cluster: HRGMv2_3037_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_13 | HRGMv2_3037_13_51 | 61422 | 62402 | - | 3.A.1.132.4 |
| TC | HRGMv2_3037_13 | HRGMv2_3037_13_52 | 62399 | 63424 | - | 3.A.1.132.9 |
| pfam | HRGMv2_3037_13 | HRGMv2_3037_13_53 | 63780 | 64049 | + | SLH |
| CAZyme | HRGMv2_3037_13 | HRGMv2_3037_13_54 | 64155 | 66467 | + | CBM54 |
Gene ID: HRGMv2_3037_13_51
Type: TC
Location: 61422 - 62402 (-)
Type: TC
Location: 61422 - 62402 (-)
Gene ID: HRGMv2_3037_13_52
Type: TC
Location: 62399 - 63424 (-)
Type: TC
Location: 62399 - 63424 (-)
Gene ID: HRGMv2_3037_13_53
Type: pfam
Location: 63780 - 64049 (+)
Type: pfam
Location: 63780 - 64049 (+)
Gene ID: HRGMv2_3037_13_54
Type: CAZyme
Location: 64155 - 66467 (+)
Type: CAZyme
Location: 64155 - 66467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.