Cluster: HRGMv2_3037_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_11 | HRGMv2_3037_11_39 | 41119 | 42105 | + | 9.B.146.1.3 |
| TC | HRGMv2_3037_11 | HRGMv2_3037_11_40 | 42159 | 43367 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3037_11 | HRGMv2_3037_11_41 | 43407 | 44570 | + | GT28 |
Gene ID: HRGMv2_3037_11_39
Type: TC
Location: 41119 - 42105 (+)
Type: TC
Location: 41119 - 42105 (+)
Gene ID: HRGMv2_3037_11_40
Type: TC
Location: 42159 - 43367 (+)
Type: TC
Location: 42159 - 43367 (+)
Gene ID: HRGMv2_3037_11_41
Type: CAZyme
Location: 43407 - 44570 (+)
Type: CAZyme
Location: 43407 - 44570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.