Cluster: HRGMv2_3037_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_10 | HRGMv2_3037_10_41 | 39680 | 40684 | - | 2.A.10.1.3 |
| TF | HRGMv2_3037_10 | HRGMv2_3037_10_42 | 40879 | 42777 | - | HTH_8 |
| TC | HRGMv2_3037_10 | HRGMv2_3037_10_43 | 42813 | 44237 | - | 2.A.25.1.9 |
| CAZyme | HRGMv2_3037_10 | HRGMv2_3037_10_44 | 44337 | 45413 | + | GT2 |
Gene ID: HRGMv2_3037_10_41
Type: TC
Location: 39680 - 40684 (-)
Type: TC
Location: 39680 - 40684 (-)
Gene ID: HRGMv2_3037_10_42
Type: TF
Location: 40879 - 42777 (-)
Type: TF
Location: 40879 - 42777 (-)
Gene ID: HRGMv2_3037_10_43
Type: TC
Location: 42813 - 44237 (-)
Type: TC
Location: 42813 - 44237 (-)
Gene ID: HRGMv2_3037_10_44
Type: CAZyme
Location: 44337 - 45413 (+)
Type: CAZyme
Location: 44337 - 45413 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.