Cluster: HRGMv2_3037_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3037_9 | HRGMv2_3037_9_72 | 100186 | 100980 | - | 3.A.1.34.1 |
| TC | HRGMv2_3037_9 | HRGMv2_3037_9_73 | 100973 | 101917 | - | 3.A.1.34.1 |
| pfam | HRGMv2_3037_9 | HRGMv2_3037_9_74 | 102026 | 103051 | - | ABC_sub_bind |
| CAZyme | HRGMv2_3037_9 | HRGMv2_3037_9_75 | 103272 | 103994 | + | GT26 |
Gene ID: HRGMv2_3037_9_72
Type: TC
Location: 100186 - 100980 (-)
Type: TC
Location: 100186 - 100980 (-)
Gene ID: HRGMv2_3037_9_73
Type: TC
Location: 100973 - 101917 (-)
Type: TC
Location: 100973 - 101917 (-)
Gene ID: HRGMv2_3037_9_74
Type: pfam
Location: 102026 - 103051 (-)
Type: pfam
Location: 102026 - 103051 (-)
Gene ID: HRGMv2_3037_9_75
Type: CAZyme
Location: 103272 - 103994 (+)
Type: CAZyme
Location: 103272 - 103994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.