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Cluster: HRGMv2_3030_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3030_8 HRGMv2_3030_8_26 30542 31675 + CE9
NULL(UNKNOWN) HRGMv2_3030_8 HRGMv2_3030_8_27 32098 32301 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3030_8 HRGMv2_3030_8_28 32355 33065 - 3.A.1.4.10
TC HRGMv2_3030_8 HRGMv2_3030_8_29 33052 33999 - 3.A.1.4.10
TC HRGMv2_3030_8 HRGMv2_3030_8_30 33996 35090 - 3.A.1.4.10
TC HRGMv2_3030_8 HRGMv2_3030_8_31 35104 35982 - 3.A.1.4.10
pfam HRGMv2_3030_8 HRGMv2_3030_8_32 36169 37368 - ANF_receptor | Peripla_BP_6
TC HRGMv2_3030_8 HRGMv2_3030_8_33 37900 39729 - 3.A.16.1.1
Gene ID: HRGMv2_3030_8_26
Type: CAZyme
Location: 30542 - 31675 (+)
Gene ID: HRGMv2_3030_8_27
Type:
Location: 32098 - 32301 (+)
Gene ID: HRGMv2_3030_8_28
Type: TC
Location: 32355 - 33065 (-)
Gene ID: HRGMv2_3030_8_29
Type: TC
Location: 33052 - 33999 (-)
Gene ID: HRGMv2_3030_8_30
Type: TC
Location: 33996 - 35090 (-)
Gene ID: HRGMv2_3030_8_31
Type: TC
Location: 35104 - 35982 (-)
Gene ID: HRGMv2_3030_8_32
Type: pfam
Location: 36169 - 37368 (-)
Gene ID: HRGMv2_3030_8_33
Type: TC
Location: 37900 - 39729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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