Cluster: HRGMv2_3030_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3030
- CGC Family ID: CGCFAM_00741
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3030_5 | HRGMv2_3030_5_41 | 41347 | 42786 | + | 3.A.1.103.6 |
| TC | HRGMv2_3030_5 | HRGMv2_3030_5_42 | 42795 | 43529 | + | 3.A.1.103.4 |
| pfam | HRGMv2_3030_5 | HRGMv2_3030_5_43 | 43513 | 44337 | + | Glycos_transf_2 | Glyco_tranf_2_2 | Glyco_tranf_2_3 |
| CAZyme | HRGMv2_3030_5 | HRGMv2_3030_5_44 | 44339 | 45307 | + | GT111 |
| pfam | HRGMv2_3030_5 | HRGMv2_3030_5_45 | 45351 | 46424 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3030_5 | HRGMv2_3030_5_46 | 46421 | 49732 | + | GT111 | GT2 | GT2 |
Gene ID: HRGMv2_3030_5_41
Type: TC
Location: 41347 - 42786 (+)
Type: TC
Location: 41347 - 42786 (+)
Gene ID: HRGMv2_3030_5_42
Type: TC
Location: 42795 - 43529 (+)
Type: TC
Location: 42795 - 43529 (+)
Gene ID: HRGMv2_3030_5_43
Type: pfam
Location: 43513 - 44337 (+)
Type: pfam
Location: 43513 - 44337 (+)
Gene ID: HRGMv2_3030_5_44
Type: CAZyme
Location: 44339 - 45307 (+)
Type: CAZyme
Location: 44339 - 45307 (+)
Gene ID: HRGMv2_3030_5_45
Type: pfam
Location: 45351 - 46424 (+)
Type: pfam
Location: 45351 - 46424 (+)
Gene ID: HRGMv2_3030_5_46
Type: CAZyme
Location: 46421 - 49732 (+)
Type: CAZyme
Location: 46421 - 49732 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900757415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.