Cluster: HRGMv2_3030_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3030
- CGC Family ID: CGCFAM_02406
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3030_3 | HRGMv2_3030_3_36 | 37153 | 37800 | - | 2.A.38.4.4 |
| TC | HRGMv2_3030_3 | HRGMv2_3030_3_37 | 37813 | 39153 | - | 2.A.38.4.3 |
| pfam | HRGMv2_3030_3 | HRGMv2_3030_3_38 | 39406 | 42078 | + | Sulfatase |
| CAZyme | HRGMv2_3030_3 | HRGMv2_3030_3_39 | 42197 | 43012 | + | GT8 |
Gene ID: HRGMv2_3030_3_36
Type: TC
Location: 37153 - 37800 (-)
Type: TC
Location: 37153 - 37800 (-)
Gene ID: HRGMv2_3030_3_37
Type: TC
Location: 37813 - 39153 (-)
Type: TC
Location: 37813 - 39153 (-)
Gene ID: HRGMv2_3030_3_38
Type: pfam
Location: 39406 - 42078 (+)
Type: pfam
Location: 39406 - 42078 (+)
Gene ID: HRGMv2_3030_3_39
Type: CAZyme
Location: 42197 - 43012 (+)
Type: CAZyme
Location: 42197 - 43012 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900757415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3030_3_39 | vegetarian > vegan | 1.12103 | 0.00364 |